Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d4aQ9D7V1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Gm29791-202ENSMUST00000207888 369 ntBASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sh2d4aQ9D7V1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm2399-201ENSMUST00000104944 225 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm7290-201ENSMUST00000104990 617 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm12918-201ENSMUST00000120234 636 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm15710-201ENSMUST00000121821 636 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm6211-202ENSMUST00000167849 925 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Mir8112-201ENSMUST00000184382 131 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Gm5075-201ENSMUST00000196916 622 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d4aQ9D7V1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Gm10849-201ENSMUST00000100397 618 ntBASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh2d4aQ9D7V1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2d4aQ9D7V1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.66■□□□□ 0.26
Sh2d4aQ9D7V1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh2d4aQ9D7V1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms