Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.88■□□□□ 0.61
Cfap53Q9D439 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.87■□□□□ 0.61
Cfap53Q9D439 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cfap53Q9D439 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.86■□□□□ 0.61
Cfap53Q9D439 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.86■□□□□ 0.61
Cfap53Q9D439 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.86■□□□□ 0.61
Cfap53Q9D439 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cfap53Q9D439 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cfap53Q9D439 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap53Q9D439 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.84■□□□□ 0.61
Cfap53Q9D439 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Gm22240-201ENSMUST00000175225 82 ntBASIC18.84■□□□□ 0.61
Cfap53Q9D439 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.84■□□□□ 0.61
Cfap53Q9D439 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap53Q9D439 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap53Q9D439 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.83■□□□□ 0.61
Cfap53Q9D439 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap53Q9D439 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap53Q9D439 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cfap53Q9D439 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap53Q9D439 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap53Q9D439 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap53Q9D439 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms