Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.22■□□□□ 0.35
Trim42Q9D2H5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim42Q9D2H5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim42Q9D2H5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim42Q9D2H5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Gm13234-201ENSMUST00000120010 747 ntBASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim42Q9D2H5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms