Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Gm21956-201ENSMUST00000179946 522 ntBASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Gm38285-201ENSMUST00000192928 922 ntBASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raet1eQ9CZQ6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raet1eQ9CZQ6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1eQ9CZQ6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms