Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Gm10138-203ENSMUST00000206952 366 ntBASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf135Q9CWS1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf135Q9CWS1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Gm18666-201ENSMUST00000190039 958 ntBASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf135Q9CWS1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rnf135Q9CWS1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rnf135Q9CWS1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf135Q9CWS1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf135Q9CWS1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms