Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.26■□□□□ 0.83
Smc3Q9CW03 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.26■□□□□ 0.83
Smc3Q9CW03 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.26■□□□□ 0.83
Smc3Q9CW03 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.25■□□□□ 0.83
Smc3Q9CW03 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Gm11249-201ENSMUST00000117071 859 ntBASIC20.24■□□□□ 0.83
Smc3Q9CW03 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.24■□□□□ 0.83
Smc3Q9CW03 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.24■□□□□ 0.83
Smc3Q9CW03 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.24■□□□□ 0.83
Smc3Q9CW03 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc3Q9CW03 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Gm10602-201ENSMUST00000098239 609 ntBASIC20.23■□□□□ 0.83
Smc3Q9CW03 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.23■□□□□ 0.83
Smc3Q9CW03 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc3Q9CW03 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Smc3Q9CW03 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.22■□□□□ 0.83
Smc3Q9CW03 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc3Q9CW03 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc3Q9CW03 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.2■□□□□ 0.82
Smc3Q9CW03 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc3Q9CW03 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms