Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Gm15375-201ENSMUST00000119510 849 ntBASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Gm11643-201ENSMUST00000119578 864 ntBASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rer1Q9CQU3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.1□□□□□ -0.15
Rer1Q9CQU3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rer1Q9CQU3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rer1Q9CQU3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rer1Q9CQU3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rer1Q9CQU3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.08□□□□□ -0.16
Rer1Q9CQU3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Gm11249-201ENSMUST00000117071 859 ntBASIC14.08□□□□□ -0.16
Rer1Q9CQU3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rer1Q9CQU3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Gm6576-201ENSMUST00000169678 883 ntBASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms