Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm7Q9CQQ8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm7Q9CQQ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Lsm7Q9CQQ8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm7Q9CQQ8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm7Q9CQQ8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms