Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim11Q99PQ2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Gm5643-201ENSMUST00000117081 966 ntBASIC19.6■□□□□ 0.73
Trim11Q99PQ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Gm10517-202ENSMUST00000192970 758 ntBASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim11Q99PQ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim11Q99PQ2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim11Q99PQ2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.58■□□□□ 0.73
Trim11Q99PQ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim11Q99PQ2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim11Q99PQ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim11Q99PQ2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Gm15378-201ENSMUST00000121894 207 ntBASIC19.57■□□□□ 0.72
Trim11Q99PQ2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim11Q99PQ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim11Q99PQ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms