Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.15■□□□□ 0.34
Cstf1Q99LC2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cstf1Q99LC2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.15■□□□□ 0.34
Cstf1Q99LC2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cstf1Q99LC2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cstf1Q99LC2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cstf1Q99LC2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Gm27459-201ENSMUST00000184860 107 ntBASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Gm43347-201ENSMUST00000200226 580 ntBASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cstf1Q99LC2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cstf1Q99LC2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms