Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Gm24589-201ENSMUST00000116692 94 ntBASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd2Q99JR8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarcd2Q99JR8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd2Q99JR8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd2Q99JR8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd2Q99JR8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd2Q99JR8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms