Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Thumpd1Q99J36 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Thumpd1Q99J36 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Gm13401-201ENSMUST00000117074 291 ntBASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Thumpd1Q99J36 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Thumpd1Q99J36 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Thumpd1Q99J36 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Thumpd1Q99J36 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.33■□□□□ 0.05
Thumpd1Q99J36 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Thumpd1Q99J36 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm11643-201ENSMUST00000119578 864 ntBASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm44549-201ENSMUST00000208351 577 ntBASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm10033-202ENSMUST00000211874 928 ntBASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Gm18671-201ENSMUST00000214826 683 ntBASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Thumpd1Q99J36 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Thumpd1Q99J36 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms