Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.81■□□□□ 0.76
Smc1bQ920F6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1bQ920F6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1bQ920F6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.79■□□□□ 0.76
Smc1bQ920F6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smc1bQ920F6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Gm27704-201ENSMUST00000185094 107 ntBASIC19.79■□□□□ 0.76
Smc1bQ920F6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1bQ920F6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1bQ920F6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1bQ920F6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.77■□□□□ 0.76
Smc1bQ920F6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1bQ920F6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc1bQ920F6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
Smc1bQ920F6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Smc1bQ920F6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.76■□□□□ 0.75
Smc1bQ920F6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Gm16061-201ENSMUST00000122167 857 ntBASIC19.76■□□□□ 0.75
Smc1bQ920F6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Mir2861-201ENSMUST00000175539 82 ntBASIC19.76■□□□□ 0.75
Smc1bQ920F6 Gm28033-201ENSMUST00000184224 96 ntBASIC19.76■□□□□ 0.75
Smc1bQ920F6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1bQ920F6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms