Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Gm17661-201ENSMUST00000170317 270 ntBASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb1Q91Y08 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb1Q91Y08 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Gm22240-201ENSMUST00000175225 82 ntBASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb1Q91Y08 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Gm12085-201ENSMUST00000119263 940 ntBASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb1Q91Y08 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb1Q91Y08 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Gm38027-201ENSMUST00000192315 235 ntBASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb1Q91Y08 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms