Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb20Q91XZ9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm37436-201ENSMUST00000193842 1085 ntBASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb20Q91XZ9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb20Q91XZ9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb20Q91XZ9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb20Q91XZ9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb20Q91XZ9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb20Q91XZ9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.55■□□□□ 0.24
Pcdhb20Q91XZ9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms