Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Gm11539-201ENSMUST00000119837 557 ntBASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Gm13436-201ENSMUST00000120418 567 ntBASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdhb22Q91XZ8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb22Q91XZ8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhb22Q91XZ8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb22Q91XZ8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb22Q91XZ8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Gm13559-201ENSMUST00000120476 863 ntBASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb22Q91XZ8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb22Q91XZ8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Gm15565-201ENSMUST00000118890 427 ntBASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb22Q91XZ8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb22Q91XZ8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms