Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhgc5Q91XW9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgc5Q91XW9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc5Q91XW9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Gm25016-201ENSMUST00000158399 131 ntBASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc5Q91XW9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Gm4974-201ENSMUST00000209974 875 ntBASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc5Q91XW9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Gm27704-201ENSMUST00000185094 107 ntBASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc5Q91XW9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms