Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Gm4974-201ENSMUST00000209974 875 ntBASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.7■□□□□ 0.74
Ddx41Q91VN6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx41Q91VN6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ddx41Q91VN6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Gm27463-201ENSMUST00000183569 57 ntBASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx41Q91VN6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx41Q91VN6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms