Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a4Q91VA1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Gm34391-201ENSMUST00000203706 907 ntBASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a4Q91VA1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a4Q91VA1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a4Q91VA1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a4Q91VA1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a4Q91VA1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a4Q91VA1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a4Q91VA1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Phf7-203ENSMUST00000226565 1971 ntBASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a4Q91VA1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Gm11336-201ENSMUST00000118168 334 ntBASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a4Q91VA1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Gm13186-201ENSMUST00000118031 316 ntBASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a4Q91VA1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a4Q91VA1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a4Q91VA1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Slc44a4Q91VA1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slc44a4Q91VA1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc44a4Q91VA1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms