Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.61■□□□□ 0.89
StrcQ8VIM6 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.61■□□□□ 0.89
StrcQ8VIM6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.61■□□□□ 0.89
StrcQ8VIM6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.61■□□□□ 0.89
StrcQ8VIM6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
StrcQ8VIM6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Psmb5-202ENSMUST00000227257 622 ntBASIC20.6■□□□□ 0.89
StrcQ8VIM6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.6■□□□□ 0.89
StrcQ8VIM6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Gm25990-201ENSMUST00000102440 86 ntBASIC20.6■□□□□ 0.89
StrcQ8VIM6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Gm7230-201ENSMUST00000173026 815 ntBASIC20.6■□□□□ 0.89
StrcQ8VIM6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
StrcQ8VIM6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
StrcQ8VIM6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
StrcQ8VIM6 Gm23935-201ENSMUST00000102303 57 ntBASIC20.58■□□□□ 0.89
StrcQ8VIM6 Gm24270-201ENSMUST00000102326 57 ntBASIC20.58■□□□□ 0.89
StrcQ8VIM6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.58■□□□□ 0.89
StrcQ8VIM6 Gm24245-201ENSMUST00000157318 57 ntBASIC20.58■□□□□ 0.89
StrcQ8VIM6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
StrcQ8VIM6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
StrcQ8VIM6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
StrcQ8VIM6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
StrcQ8VIM6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
StrcQ8VIM6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Gm29707-201ENSMUST00000196325 491 ntBASIC20.57■□□□□ 0.88
StrcQ8VIM6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrcQ8VIM6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.56■□□□□ 0.88
StrcQ8VIM6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
StrcQ8VIM6 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.56■□□□□ 0.88
StrcQ8VIM6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.55■□□□□ 0.88
StrcQ8VIM6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrcQ8VIM6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Gm13312-201ENSMUST00000119631 718 ntBASIC20.54■□□□□ 0.88
StrcQ8VIM6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms