Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Nespas-201ENSMUST00000143738 1083 ntBASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.35■□□□□ 0.37
Rpa1Q8VEE4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpa1Q8VEE4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rpa1Q8VEE4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpa1Q8VEE4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpa1Q8VEE4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms