Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf8Q8VC56 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Rnf8Q8VC56 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf8Q8VC56 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Gm27275-201ENSMUST00000184318 272 ntBASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Zfp783-201ENSMUST00000095946 670 ntBASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf8Q8VC56 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Gm38285-201ENSMUST00000192928 922 ntBASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.56■□□□□ 0.24
Rnf8Q8VC56 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Gm13168-201ENSMUST00000121771 632 ntBASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Gm13158-201ENSMUST00000122007 736 ntBASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf8Q8VC56 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms