Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clptm1Q8VBZ3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clptm1Q8VBZ3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clptm1Q8VBZ3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clptm1Q8VBZ3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clptm1Q8VBZ3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clptm1Q8VBZ3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clptm1Q8VBZ3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms