Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Zfp783-201ENSMUST00000095946 670 ntBASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Gm2399-201ENSMUST00000104944 225 ntBASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Nup35Q8R4R6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.04□□□□□ -0.16
Nup35Q8R4R6 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.04□□□□□ -0.16
Nup35Q8R4R6 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Gm10493-201ENSMUST00000097270 612 ntBASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup35Q8R4R6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Dancr-204ENSMUST00000132389 2347 ntBASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Mir2861-201ENSMUST00000175539 82 ntBASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup35Q8R4R6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup35Q8R4R6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup35Q8R4R6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms