Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Gm16112-201ENSMUST00000159075 382 ntBASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Gm18026-201ENSMUST00000222789 727 ntBASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb1Q8R3Z5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb1Q8R3Z5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb1Q8R3Z5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.33■□□□□ 0.69
Cacnb1Q8R3Z5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Gm37213-201ENSMUST00000193077 586 ntBASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Gm44711-201ENSMUST00000205414 1264 ntBASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb1Q8R3Z5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Gm10517-202ENSMUST00000192970 758 ntBASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb1Q8R3Z5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Gm8902-201ENSMUST00000174341 1096 ntBASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 AC173482.2-201ENSMUST00000224044 750 ntBASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.31■□□□□ 0.68
Cacnb1Q8R3Z5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacnb1Q8R3Z5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.29■□□□□ 0.68
Cacnb1Q8R3Z5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacnb1Q8R3Z5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cacnb1Q8R3Z5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms