Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim29Q8R2Q0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim29Q8R2Q0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim29Q8R2Q0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim29Q8R2Q0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim29Q8R2Q0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Trim29Q8R2Q0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim29Q8R2Q0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Trim29Q8R2Q0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms