Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r28Q8R2C9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r28Q8R2C9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Gm37025-201ENSMUST00000195159 829 ntBASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Gm43799-201ENSMUST00000201845 579 ntBASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r28Q8R2C9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Gm11539-201ENSMUST00000119837 557 ntBASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Gm13436-201ENSMUST00000120418 567 ntBASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Gm27463-201ENSMUST00000183569 57 ntBASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r28Q8R2C9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Gm8969-201ENSMUST00000199694 526 ntBASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r28Q8R2C9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Gm9731-201ENSMUST00000209480 747 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms