Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nudcd3Q8R1N4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nudcd3Q8R1N4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nudcd3Q8R1N4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Gm2399-201ENSMUST00000104944 225 ntBASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nudcd3Q8R1N4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nudcd3Q8R1N4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Zfp783-201ENSMUST00000095946 670 ntBASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nudcd3Q8R1N4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Gm7291-201ENSMUST00000199147 382 ntBASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Gm6365-201ENSMUST00000054711 744 ntBASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.19■□□□□ 0.34
Nudcd3Q8R1N4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms