Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tm6sf2Q8R1J1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tm6sf2Q8R1J1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Gm17661-201ENSMUST00000170317 270 ntBASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tm6sf2Q8R1J1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Gm2274-201ENSMUST00000184539 609 ntBASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tm6sf2Q8R1J1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.14■□□□□ 0.18
Tm6sf2Q8R1J1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tm6sf2Q8R1J1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tm6sf2Q8R1J1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms