Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf7Q8R0S1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf7Q8R0S1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Gm38027-201ENSMUST00000192315 235 ntBASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf7Q8R0S1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Gm715-201ENSMUST00000117865 831 ntBASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
Atf7Q8R0S1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atf7Q8R0S1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atf7Q8R0S1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Gm10812-201ENSMUST00000099864 546 ntBASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atf7Q8R0S1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms