Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Treml1Q8K558 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Treml1Q8K558 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.95■□□□□ 0.3
Treml1Q8K558 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Treml1Q8K558 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.95■□□□□ 0.3
Treml1Q8K558 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Treml1Q8K558 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.95■□□□□ 0.3
Treml1Q8K558 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Treml1Q8K558 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.95■□□□□ 0.3
Treml1Q8K558 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.94■□□□□ 0.3
Treml1Q8K558 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.94■□□□□ 0.3
Treml1Q8K558 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Gm30025-201ENSMUST00000218555 728 ntBASIC16.94■□□□□ 0.3
Treml1Q8K558 Odf3b-204ENSMUST00000227834 930 ntBASIC16.94■□□□□ 0.3
Treml1Q8K558 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Treml1Q8K558 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Gm7638-201ENSMUST00000121348 967 ntBASIC16.93■□□□□ 0.3
Treml1Q8K558 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Treml1Q8K558 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Treml1Q8K558 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Treml1Q8K558 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Treml1Q8K558 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms