Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf4Q8K4J2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Gm8493-201ENSMUST00000196881 489 ntBASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf4Q8K4J2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf4Q8K4J2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Gm29791-202ENSMUST00000207888 369 ntBASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Gm13241-201ENSMUST00000094493 780 ntBASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf4Q8K4J2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf4Q8K4J2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf4Q8K4J2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms