Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Rtn1Q8K0T0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Gm10252-201ENSMUST00000209541 832 ntBASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Rtn1Q8K0T0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn1Q8K0T0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn1Q8K0T0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rtn1Q8K0T0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn1Q8K0T0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn1Q8K0T0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn1Q8K0T0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn1Q8K0T0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn1Q8K0T0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn1Q8K0T0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn1Q8K0T0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn1Q8K0T0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn1Q8K0T0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms