Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgcs1Q8JZK9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmgcs1Q8JZK9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmgcs1Q8JZK9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgcs1Q8JZK9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgcs1Q8JZK9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms