Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfwd3Q8CIK8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfwd3Q8CIK8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.18■□□□□ 0.18
Rfwd3Q8CIK8 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfwd3Q8CIK8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfwd3Q8CIK8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfwd3Q8CIK8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms