Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne4Q8CII8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.45■□□□□ 0.7
Syne4Q8CII8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Syne4Q8CII8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne4Q8CII8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.44■□□□□ 0.7
Syne4Q8CII8 Gm18195-201ENSMUST00000207604 706 ntBASIC19.44■□□□□ 0.7
Syne4Q8CII8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.44■□□□□ 0.7
Syne4Q8CII8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne4Q8CII8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.43■□□□□ 0.7
Syne4Q8CII8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syne4Q8CII8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.42■□□□□ 0.7
Syne4Q8CII8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syne4Q8CII8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms