Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm12382-201ENSMUST00000122005 922 ntBASIC17.57■□□□□ 0.4
CopaQ8CIE6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.57■□□□□ 0.4
CopaQ8CIE6 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.57■□□□□ 0.4
CopaQ8CIE6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Gm9987-201ENSMUST00000069768 567 ntBASIC17.57■□□□□ 0.4
CopaQ8CIE6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CopaQ8CIE6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CopaQ8CIE6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Gm11643-201ENSMUST00000119578 864 ntBASIC17.56■□□□□ 0.4
CopaQ8CIE6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.56■□□□□ 0.4
CopaQ8CIE6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CopaQ8CIE6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.55■□□□□ 0.4
CopaQ8CIE6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.55■□□□□ 0.4
CopaQ8CIE6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.55■□□□□ 0.4
CopaQ8CIE6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.54■□□□□ 0.4
CopaQ8CIE6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.54■□□□□ 0.4
CopaQ8CIE6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.54■□□□□ 0.4
CopaQ8CIE6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopaQ8CIE6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.53■□□□□ 0.4
CopaQ8CIE6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.52■□□□□ 0.4
CopaQ8CIE6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Gm6433-201ENSMUST00000118634 875 ntBASIC17.52■□□□□ 0.4
CopaQ8CIE6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CopaQ8CIE6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms