Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Zc3h3Q8CHP0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zc3h3Q8CHP0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Gm14822-201ENSMUST00000122247 291 ntBASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zc3h3Q8CHP0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Gm5186-201ENSMUST00000218781 920 ntBASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zc3h3Q8CHP0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Gm14494-201ENSMUST00000118786 435 ntBASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zc3h3Q8CHP0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zc3h3Q8CHP0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zc3h3Q8CHP0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zc3h3Q8CHP0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zc3h3Q8CHP0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms