Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Gm21559-201ENSMUST00000220638 855 ntBASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Gm8587-201ENSMUST00000076538 843 ntBASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh1Q8CGV4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh1Q8CGV4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Gm6345-202ENSMUST00000180900 204 ntBASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.71■□□□□ 0.27
Rdh1Q8CGV4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rdh1Q8CGV4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh1Q8CGV4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Gm10566-201ENSMUST00000086739 996 ntBASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh1Q8CGV4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms