Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.22■□□□□ 0.99
Smc4Q8CG47 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Gm18958-201ENSMUST00000174258 762 ntBASIC21.21■□□□□ 0.99
Smc4Q8CG47 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Gm8969-201ENSMUST00000199694 526 ntBASIC21.21■□□□□ 0.99
Smc4Q8CG47 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc4Q8CG47 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smc4Q8CG47 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.2■□□□□ 0.99
Smc4Q8CG47 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Smc4Q8CG47 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smc4Q8CG47 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.2■□□□□ 0.98
Smc4Q8CG47 Gm21559-201ENSMUST00000220638 855 ntBASIC21.2■□□□□ 0.98
Smc4Q8CG47 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Gm8587-201ENSMUST00000076538 843 ntBASIC21.2■□□□□ 0.98
Smc4Q8CG47 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.2■□□□□ 0.98
Smc4Q8CG47 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Gm25016-201ENSMUST00000158399 131 ntBASIC21.19■□□□□ 0.98
Smc4Q8CG47 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc4Q8CG47 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Smc4Q8CG47 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms