Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smc5Q8CG46 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smc5Q8CG46 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.31■■□□□ 1
Smc5Q8CG46 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc5Q8CG46 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Smc5Q8CG46 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc5Q8CG46 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc5Q8CG46 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.3■■□□□ 1
Smc5Q8CG46 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.3■■□□□ 1
Smc5Q8CG46 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.3■■□□□ 1
Smc5Q8CG46 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
Smc5Q8CG46 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smc5Q8CG46 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Smc5Q8CG46 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Smc5Q8CG46 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Gm18025-201ENSMUST00000221733 862 ntBASIC21.29■■□□□ 1
Smc5Q8CG46 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smc5Q8CG46 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.29■■□□□ 1
Smc5Q8CG46 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smc5Q8CG46 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smc5Q8CG46 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc5Q8CG46 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Smc5Q8CG46 Gm42545-201ENSMUST00000202755 922 ntBASIC21.27■■□□□ 1
Smc5Q8CG46 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.27■■□□□ 1
Smc5Q8CG46 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smc5Q8CG46 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc5Q8CG46 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Smc5Q8CG46 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc5Q8CG46 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc5Q8CG46 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Smc5Q8CG46 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms