Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Gm27463-201ENSMUST00000183569 57 ntBASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2bQ8CFI7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2bQ8CFI7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Gm7791-201ENSMUST00000219066 539 ntBASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2bQ8CFI7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Gm6433-201ENSMUST00000118634 875 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Gm7889-201ENSMUST00000185591 958 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Gm9987-201ENSMUST00000069768 567 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.46■□□□□ 0.55
Polr2bQ8CFI7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Polr2bQ8CFI7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Polr2bQ8CFI7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.46■□□□□ 0.54
Polr2bQ8CFI7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Polr2bQ8CFI7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Gm9731-201ENSMUST00000209480 747 ntBASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2bQ8CFI7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2bQ8CFI7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms