Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Trmt13-210ENSMUST00000198454 880 ntBASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Gm4974-201ENSMUST00000209974 875 ntBASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc38Q8CDN8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc38Q8CDN8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Gm12382-201ENSMUST00000122005 922 ntBASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc38Q8CDN8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc38Q8CDN8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc38Q8CDN8 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc38Q8CDN8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Gm5643-201ENSMUST00000117081 966 ntBASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Gm10517-202ENSMUST00000192970 758 ntBASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Gm43183-201ENSMUST00000200632 547 ntBASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.07■□□□□ 0.64
Ccdc38Q8CDN8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms