Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm6659-201ENSMUST00000174752 547 ntBASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf31Q8CCF0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf31Q8CCF0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.81■□□□□ 0.6
Prpf31Q8CCF0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Gm13474-201ENSMUST00000122466 815 ntBASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf31Q8CCF0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Gm22697-201ENSMUST00000175194 63 ntBASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf31Q8CCF0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf31Q8CCF0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Gm10013-201ENSMUST00000106074 672 ntBASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf31Q8CCF0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms