Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.1■□□□□ 0.81
Alx1Q8C8B0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.1■□□□□ 0.81
Alx1Q8C8B0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Alx1Q8C8B0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.09■□□□□ 0.81
Alx1Q8C8B0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Gm18958-201ENSMUST00000174258 762 ntBASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Mir1668-201ENSMUST00000184114 107 ntBASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Alx1Q8C8B0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
Alx1Q8C8B0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Alx1Q8C8B0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Alx1Q8C8B0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Alx1Q8C8B0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms