Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpc5Q8C7D3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pabpc5Q8C7D3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pabpc5Q8C7D3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pabpc5Q8C7D3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pabpc5Q8C7D3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Gm27741-201ENSMUST00000185060 237 ntBASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pabpc5Q8C7D3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms