Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp44Q8C2S0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp44Q8C2S0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Usp44Q8C2S0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp44Q8C2S0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp44Q8C2S0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Gm13559-201ENSMUST00000120476 863 ntBASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp44Q8C2S0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Usp44Q8C2S0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp44Q8C2S0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Mir6982-201ENSMUST00000184354 68 ntBASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp44Q8C2S0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.08■□□□□ 0.81
Usp44Q8C2S0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms