Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Gm45328-201ENSMUST00000210942 917 ntBASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptcd1Q8C2E4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Gm5864-201ENSMUST00000202263 970 ntBASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Birc2-201ENSMUST00000054878 378 ntBASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ptcd1Q8C2E4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ptcd1Q8C2E4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ptcd1Q8C2E4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ptcd1Q8C2E4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ptcd1Q8C2E4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Ptcd1Q8C2E4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.13■□□□□ 0.97
Ptcd1Q8C2E4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ptcd1Q8C2E4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Rarb-207ENSMUST00000225921 2756 ntBASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Gm37722-201ENSMUST00000193757 208 ntBASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ptcd1Q8C2E4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Olfr129-201ENSMUST00000122318 993 ntBASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 AW822252-206ENSMUST00000208904 237 ntBASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Ptcd1Q8C2E4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ptcd1Q8C2E4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms