Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf3Q8C120 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3rf3Q8C120 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf3Q8C120 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.89■□□□□ 0.46
Sh3rf3Q8C120 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sh3rf3Q8C120 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sh3rf3Q8C120 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3rf3Q8C120 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Gm12085-201ENSMUST00000119263 940 ntBASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Gm24841-201ENSMUST00000158676 357 ntBASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh3rf3Q8C120 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3rf3Q8C120 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms