Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim47Q8C0E3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Gm8969-201ENSMUST00000199694 526 ntBASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim47Q8C0E3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Gm16061-201ENSMUST00000122167 857 ntBASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Gm18032-201ENSMUST00000222541 538 ntBASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim47Q8C0E3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim47Q8C0E3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim47Q8C0E3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim47Q8C0E3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim47Q8C0E3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim47Q8C0E3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Trim47Q8C0E3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim47Q8C0E3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trim47Q8C0E3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms